multiOmicsModuleInterAnalysis: Multi Omics Module Inter Module Analysis
In cavei/MOSClip: Multi Omics Survival Clip
Description
Usage
Arguments
Value
Description
Given a list of pathway results along with the summary table, it summaizes all module results
Usage
1
2
multiOmicsModuleInterAnalysis(moduleSummary, momTestObj,
zscoreThr = 0.05, min_prop_pca = 0.15, min_prop_events = 0.05)
Arguments
moduleSummary
the table that summarized the module results
momTestObj
the list of MOM results
zscoreThr
significance threshold
min_prop_pca
the minimal proportion to compute the pca classes
min_prop_events
the minimal proportion to compute the event classes
Value
a list
sigOmicsPart
for each Omic the significant
pvaluesSummary
for each omic, the minimum pvalue
allGenes
the genes used
cavei/MOSClip documentation built on May 12, 2019, 5:22 p.m.
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Description Usage Arguments Value
Description
Given a list of pathway results along with the summary table, it summaizes all module results
Usage
1 2 | multiOmicsModuleInterAnalysis(moduleSummary, momTestObj,
zscoreThr = 0.05, min_prop_pca = 0.15, min_prop_events = 0.05)
|
Arguments
moduleSummary |
the table that summarized the module results |
momTestObj |
the list of MOM results |
zscoreThr |
significance threshold |
min_prop_pca |
the minimal proportion to compute the pca classes |
min_prop_events |
the minimal proportion to compute the event classes |
Value
a list
sigOmicsPart |
for each Omic the significant |
pvaluesSummary |
for each omic, the minimum pvalue |
allGenes |
the genes used |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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