fitGrowthCurvesIndividual: fitGrowthCurvesIndividual

In chapmandu2/IncucyteDRC: Dose Response Curves from Incucyte Proliferation Assays

Description

Function to fit splines to the growth curve data in an IncucyteDRCSet object

Usage

fitGrowthCurvesIndividual(idrc_set, span = 0.3)

Arguments

idrc_set	IncucyteDRCSet object
span	Set the span to be used in the curve fit. Default 0.3.

Value

IncucyteDRCSet object

Examples

pm_file <- system.file(file='extdata/example.PlateMap', package='IncucyteDRC')
test_pm <- importPlatemapXML(pm_file)
data_file <- system.file(file='extdata/example_data.txt', package='IncucyteDRC')
test_data <- importIncucyteData(data_file, metric='pc')

test_list <- splitIncucyteDRCPlateData(test_pm, test_data, group_columns='growthcondition')

print(test_list)

test_idrc_set <- fitGrowthCurvesIndividual(test_list[[2]])

chapmandu2/IncucyteDRC documentation built on May 13, 2019, 3:28 p.m.