splitIncucyteDRCPlateData: splitIncucyteDRCPlateData

In chapmandu2/IncucyteDRC: Dose Response Curves from Incucyte Proliferation Assays

Description

Function to construct a list of IncucyteDRCSet objects from a IncucyteDRCPlateData object.

Usage

splitIncucyteDRCPlateData(platemap, platedata, group_columns, cut_time = NULL)

Arguments

platemap	Platemap dataframe of the form generated by importPlatemapXML
platedata	IncucyteDRCPlateData object to be split
group_columns	Vector of columns that are present in the data frame to generate the groups.
cut_time	The time at which to extract the data for the dose response curve. Default is NULL.

Value

list of IncucyteDRCSet objects

Examples

pm_file <- system.file(file='extdata/example.PlateMap', package='IncucyteDRC')
test_pm <- importPlatemapXML(pm_file)
data_file <- system.file(file='extdata/example_data.txt', package='IncucyteDRC')
test_data <- importIncucyteData(data_file, metric='pc')

test_list <- splitIncucyteDRCPlateData(test_pm, test_data, group_columns='growthcondition')

print(test_list)

chapmandu2/IncucyteDRC documentation built on May 13, 2019, 3:28 p.m.