plotIncucyteDRCSet: plotIncucyteDRCSet

In chapmandu2/IncucyteDRC: Dose Response Curves from Incucyte Proliferation Assays

Description

Plot the growth curve data from an IncucyteDRCSet object

Usage

plotIncucyteDRCSet(idrc_set, grouped = FALSE)

Arguments

idrc_set	IncucyteDRCSet object
grouped	Boolean - whether the curves should be grouped or not.

Value

ggplot object

Examples

pm_file <- system.file(file='extdata/example.PlateMap', package='IncucyteDRC')
test_pm <- importPlatemapXML(pm_file)
data_file <- system.file(file='extdata/example_data.txt', package='IncucyteDRC')
test_data <- importIncucyteData(data_file, metric='pc')

test_list <- splitIncucyteDRCPlateData(test_pm, test_data, group_columns='growthcondition')

print(test_list)

test_idrc_set <- fitGrowthCurvesGrouped(test_list[[2]])
test_idrc_set <- fitGrowthCurvesIndividual(test_idrc_set)
plotIncucyteDRCSet(test_idrc_set, grouped=FALSE)
plotIncucyteDRCSet(test_idrc_set, grouped=TRUE)

chapmandu2/IncucyteDRC documentation built on May 13, 2019, 3:28 p.m.