DE.gettripple: DE.gettripple
In chenweng1991/EZsinglecell:
Description
Usage
Arguments
Value
Examples
Description
This function is to prepare the data format that is used to differentially expression calling. It include the raw matrix; data.info and size effect
Usage
1
DE.gettripple(datapair, cpcol, withscran = F)
Arguments
datapair
tyhe datapair generated from datapair.mk
cpcol
The column name for comparison.
withscran
if true, use deconvolution to calculate size effect.
Value
This will return .tri.dummy file that is the input for DE analysis
Examples
1
ROCKvsnorock.endo.tri.dummy<-DE.gettripple(ROCKvsnorock.endo.paired,cpcol="name")
chenweng1991/EZsinglecell documentation built on July 11, 2020, 3:23 p.m.
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Description Usage Arguments Value Examples
Description
This function is to prepare the data format that is used to differentially expression calling. It include the raw matrix; data.info and size effect
Usage
1 | DE.gettripple(datapair, cpcol, withscran = F)
|
Arguments
datapair |
tyhe datapair generated from datapair.mk |
cpcol |
The column name for comparison. |
withscran |
if true, use deconvolution to calculate size effect. |
Value
This will return .tri.dummy file that is the input for DE analysis
Examples
1 | ROCKvsnorock.endo.tri.dummy<-DE.gettripple(ROCKvsnorock.endo.paired,cpcol="name")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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