Description Usage Arguments Value Examples
This function is to make a datapair that includes UMI/normalized UMI ,atrix as well as information table, out of one or multiple seurat objects
1 2 | datapair.mk(Seurat.ob.list, cols, pick.list, normalizecellsize = F,
randomizecelloirder = T)
|
Seurat.ob.list |
a list of seurat object that I will extract data from |
cols |
a vector of columns that will be considered for each object in order |
pick.list |
a list of vectors that set the rules to take data |
normalizecellsize, |
if true, then normalize the matrix by total cell umi. Default is F '@param randomizecelloirder If T, randomize the cell order in matrix, default is T |
return data pair that can be used for DE, bubble plot and others.
1 |
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