Files in cmmr/rbiom
Read/Write, Analyze, and Visualize 'BIOM' Data

.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
NEWS.md R/RcppExports.R R/adiv_table.r R/apcoa.r R/as_rbiom.r R/bdiv_heatmap.r R/bdiv_ord_plot.r R/bdiv_ord_table.r R/bdiv_table.r R/biom_merge.r R/biom_ply.r R/boxplot.r R/boxplot_build.r R/boxplot_stats.r R/cache.r R/clustering.r R/convert.r R/corrplot.r R/corrplot_build.r R/corrplot_stats.r R/data.r R/distmat_ord_table.r R/distmat_stats.r R/documentation.r R/embed.r R/geom_dendro.r R/import_table.r R/plot_build.r R/plot_facets.r R/plot_heatmap.r R/plot_layers.r R/plot_palettes.r R/plot_provenance.r R/rare_multiplot.r R/rare_stacked.r R/rarefy.r R/rbiom-deprecated.r R/rbiom-package.R R/rbiom_objects.r R/read_biom.r R/read_fasta.r R/read_tree.r R/reexport.r R/s3_methods.r R/speed_ups.r R/stats_common.r R/stats_emmeans.r R/stats_table.r R/stats_wilcox.r R/taxa_heatmap.r R/taxa_map.r R/taxa_stacked.r R/taxa_table.r R/tree_plot.r R/utils.r R/validate.r R/write_biom.r R/write_xlsx.r R/zzz.R README.Rmd README.md
alt/ag200.biom
alt/rcpp_beta_div.cpp
alt/rcpp_unifrac.cpp
build.r
conda/r-rbiom/bld.bat
conda/r-rbiom/build.sh
conda/r-rbiom/meta.yaml
cran-comments.md
data/babies.rda
data/gems.rda
data/hmp50.rda
docs/404.html
docs/LICENSE-text.html
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exec/rbiom_subset.r
inst/extdata/hmp50.bz2
inst/extdata/newick.tre
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paper.bib
paper.md
pkgdown/_pkgdown.yml
pkgdown/extra.css
rbiom.txt
src/RcppExports.cpp
src/par_beta_div.cpp
src/par_unifrac.cpp
src/rcpp_alpha_div.cpp
src/rcpp_rarefy.cpp
src/rcpp_treeIO.cpp
tests/testthat.R tests/testthat/Rplots.pdf tests/testthat/_test-accessors.r tests/testthat/_test-adiv_boxplot.r tests/testthat/_test_calculations.r tests/testthat/_test_distance.r tests/testthat/_test_file_io.r tests/testthat/_test_subsetting.r tests/testthat/_test_tree.r tests/testthat/helper.r
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tests/testthat/outputs/adiv_table.rds
tests/testthat/outputs/bdiv_dist.rds
tests/testthat/outputs/rarefy.rds
tests/testthat/outputs/select_ex1.rds
tests/testthat/outputs/select_ex2.rds
tests/testthat/outputs/select_ex3.rds
tests/testthat/outputs/subset_ex1.rds
tests/testthat/outputs/subset_ex2.rds
tests/testthat/outputs/subset_ex3.rds
tests/testthat/outputs/taxa_rollup.rds
tests/testthat/test-adiv_table.r tests/testthat/test-as_rbiom.r
vignettes/.gitignore
vignettes/articles/aes.Rmd vignettes/articles/bdiv_cmp.Rmd vignettes/articles/diversity.Rmd vignettes/articles/importing.Rmd vignettes/articles/plots.Rmd vignettes/articles/rbiom.Rmd vignettes/articles/regression.Rmd vignettes/articles/scales.Rmd vignettes/articles/statistics.Rmd
cmmr/rbiom documentation built on Aug. 11, 2024, 6:35 a.m.