expData: expData Get data item from an input 'SingleCellExperiment'...
In compbiomed/singleCellTK: Comprehensive and Interactive Analysis of Single Cell RNA-Seq Data
expData R Documentation
expData
Get data item from an input SingleCellExperiment object. The data item can be an assay, altExp (subset) or a reducedDim, which is retrieved based on the name of the data item.
Description
expData
Get data item from an input SingleCellExperiment object. The data item can be an assay, altExp (subset) or a reducedDim, which is retrieved based on the name of the data item.
Usage
expData(inSCE, assayName)
Arguments
inSCE
Input SingleCellExperiment object.
assayName
Specify the name of the data item to retrieve.
Value
Specified data item.
Examples
data(scExample, package = "singleCellTK")
mat <- expData(sce, "counts")
compbiomed/singleCellTK documentation built on May 8, 2024, 6:58 p.m.
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| expData | R Documentation |
expData
Get data item from an input SingleCellExperiment object. The data item can be an assay, altExp (subset) or a reducedDim, which is retrieved based on the name of the data item.
Description
expData
Get data item from an input SingleCellExperiment object. The data item can be an assay, altExp (subset) or a reducedDim, which is retrieved based on the name of the data item.
Usage
expData(inSCE, assayName)
Arguments
inSCE |
Input |
assayName |
Specify the name of the data item to retrieve. |
Value
Specified data item.
Examples
data(scExample, package = "singleCellTK")
mat <- expData(sce, "counts")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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