davnovak/SingleBench: Framework for benchmarking and optimising dimension-reduction and clustering pipelines in expression data analysis

SingleBench provides an extensible framework for applying dimension-reduction, clustering tools and combinations thereof to single-cell data. SingleBench is built to allow for rapid design of pipelines to benchmark methods and find optimal parameters, easy addition of new method wrappers and straightforward production of graphical reports.

Getting started

Package details

AuthorDavid Novak
MaintainerDavid Novak <davidnovakcz@hotmail.com>
LicenseMIT
Version1.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("davnovak/SingleBench")
davnovak/SingleBench documentation built on Dec. 19, 2021, 9:10 p.m.