PlotCoRanking: Plot collapsed co-ranking matrix for heatmap for projection...
In davnovak/SingleBench: Framework for benchmarking and optimising dimension-reduction and clustering pipelines in expression data analysis
View source: R/04_Visual_CoRanking.R
Description
Creates plot showing collapsed co-ranking matrix of a dimension-reduction layout as a heatmap.
Usage
1
PlotCoRanking(benchmark, idx.subpipeline, idx.n_param = NULL, log = TRUE)
Arguments
benchmark
an object of class Benchmark, as generated by the constructor Benchmark and evaluated using Evaluate.Benchmark
idx.subpipeline
integer value: index of subpipeline that includes a projection step
idx.n_param
optional integer value: index of subpipeline n-parameter iteration. Default value is NULL
davnovak/SingleBench documentation built on Dec. 19, 2021, 9:10 p.m.
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View source: R/04_Visual_CoRanking.R
Description
Creates plot showing collapsed co-ranking matrix of a dimension-reduction layout as a heatmap.
Usage
1 | PlotCoRanking(benchmark, idx.subpipeline, idx.n_param = NULL, log = TRUE)
|
Arguments
benchmark |
an object of class |
idx.subpipeline |
integer value: index of subpipeline that includes a projection step |
idx.n_param |
optional integer value: index of subpipeline n-parameter iteration. Default value is |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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