GetProjection: Get 'Benchmark' latent-space projection

In davnovak/SingleBench: Framework for benchmarking and optimising dimension-reduction and clustering pipelines in expression data analysis

Description

Extracts coordinate matrix of a latent-space projection generated by evaluating an object of type Benchmark.

Usage

GetProjection(benchmark, idx.subpipeline, idx.n_param = NULL)

Arguments

benchmark	object of type Benchmark
idx.subpipeline	integer: index of a sub-pipeline of benchmark
idx.n_param	integer: index of an n-parameter iteration of a sub-pipeline of benchmark

See Also

• Benchmark: constructs a Benchmark object (benchmark pipeline set-up)\

• Evaluate: runs all benchmark sub-pipelines and scores the performance of each tool

davnovak/SingleBench documentation built on Dec. 19, 2021, 9:10 p.m.