GetClusteringScoringTable: Get 'Benchmark' clustering evaluation scores table

In davnovak/SingleBench: Framework for benchmarking and optimising dimension-reduction and clustering pipelines in expression data analysis

Description

Returns a tibble of clustering evaluation metric values for specified subpipeline of a Benchmark object (benchmark pipeline set-up).

Usage

GetClusteringScoringTable(benchmark, idx.subpipeline)

Arguments

benchmark	object of type Benchmark
idx.subpipeline	integer: index of a sub-pipeline of benchmark that includes a clustering step

See Also

• Benchmark: constructs a Benchmark object (benchmark pipeline set-up)

• Evaluate: runs all benchmark sub-pipelines and scores the performance of each tool

davnovak/SingleBench documentation built on Dec. 19, 2021, 9:10 p.m.