Description Usage Arguments Value Author(s)
Create a DsATAC dataset from multiple input fragment bed files
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sampleAnnot |
data.frame specifying the sample annotation table |
bedFiles |
either a character vector of the same length as sampleAnnot has rows, specifying the file paths of the bed files for each
sample or a single character string specifying the column name in |
genome |
genome assembly |
regionSets |
a list of GRanges objects which contain region sets over which count data will be aggregated |
sampleIdCol |
column name in the sample annotation table containing unique sample identifiers. If |
diskDump |
should large data objects (count matrices, fragment data, ...) be disk-backed to save main memory |
keepInsertionInfo |
flag indicating whether to maintain the insertion information in the resulting object. Only relevant when |
DsATAC
object
Fabian Mueller
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