filterByGRanges-DsATAC-method: filterByGRanges-methods

In demuellae/ChrAccR: Analyzing chromatin accessibility data in R

Description

Filter out regions based on a GRanges object

Usage

## S4 method for signature 'DsATAC'
filterByGRanges(.object, gr, method = "black")

Arguments

.object	DsATAC object
gr	GRanges object used for filtering
method	character string specifying the method. Can be "white" to treat gr as a whitelist (i.e. only regions and fragments overlapping with it are retained) or "black" (default) to treat it as a blacklist.

Value

a new, filtered DsATAC object

Author(s)

Fabian Mueller

demuellae/ChrAccR documentation built on Jan. 20, 2020, 3:03 a.m.