exportCountTracks-DsATAC-method: exportCountTracks-methods
In demuellae/ChrAccR: Analyzing chromatin accessibility data in R
Description
Usage
Arguments
Value
Author(s)
Description
export count data as genome tracks (e.g. for visualization in the browser)
Usage
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## S4 method for signature 'DsATAC'
exportCountTracks(
.object,
type,
outDir,
formats = c("bed", "igv"),
groupBy = NULL
)
Arguments
.object
DsATAC object
type
character string specifying the region type
outDir
output directory. Must be existing.
formats
browser format. Currently only bed and "igv" are supported
groupBy
a column in the sample annotation table to group by (the mean will be computed)
Value
nothing of particular interest
Author(s)
Fabian Mueller
demuellae/ChrAccR documentation built on Jan. 20, 2020, 3:03 a.m.
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Description Usage Arguments Value Author(s)
Description
export count data as genome tracks (e.g. for visualization in the browser)
Usage
1 2 3 4 5 6 7 8 | ## S4 method for signature 'DsATAC'
exportCountTracks(
.object,
type,
outDir,
formats = c("bed", "igv"),
groupBy = NULL
)
|
Arguments
.object |
|
type |
character string specifying the region type |
outDir |
output directory. Must be existing. |
formats |
browser format. Currently only bed and "igv" are supported |
groupBy |
a column in the sample annotation table to group by (the mean will be computed) |
Value
nothing of particular interest
Author(s)
Fabian Mueller
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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