getGenomeObject: getGenomeObject
In demuellae/ChrAccR: Analyzing chromatin accessibility data in R
Description
Usage
Arguments
Value
View source: R/utils_chromVAR.R
Description
retrieve the appropriate BSgenome for an assembly string
Usage
1
getGenomeObject(assembly, adjChrNames = TRUE)
Arguments
assembly
string specifying the assembly
adjChrNames
should the prefix "chr" be added to main chromosomes if not already present and chrMT be renamed to chrM?
Value
BSgenome object
demuellae/ChrAccR documentation built on Jan. 20, 2020, 3:03 a.m.
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Description Usage Arguments Value
View source: R/utils_chromVAR.R
Description
retrieve the appropriate BSgenome for an assembly string
Usage
1 | getGenomeObject(assembly, adjChrNames = TRUE)
|
Arguments
assembly |
string specifying the assembly |
adjChrNames |
should the prefix "chr" be added to main chromosomes if not already present and chrMT be renamed to chrM? |
Value
BSgenome object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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