This is a set of functions I have been using in my various analyses in the El-Sayed laboratory. The set of tasks included herein run a spectrum from preprocessing count-tables from RNAseq-like data, through differential expression analyses, to post-processing tasks like gene ontology enrichment. Along the way, these function seek to make plotting analyses consistent, provide multiple entry-points to the various tools, and handle corner cases which are not flexibly handled by the packages this is based upon.
Package details |
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Author | Ashton Trey Belew, Keith Hughitt |
Bioconductor views | DifferentialExpression |
Maintainer | Ashton Trey Belew <abelew@gmail.com> |
License | GPL-2 | file LICENSE |
Version | 1.0 |
Package repository | View on GitHub |
Installation |
Install the latest version of this package by entering the following in R:
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