all_gprofiler: Run simple_gprofiler on every table from...

In elsayed-lab/hpgltools: A pile of (hopefully) useful R functions

Run simple_gprofiler on every table from extract_significant_genes()

Description

Run simple_gprofiler on every table from extract_significant_genes()

Usage

all_gprofiler(
  sig,
  according_to = "deseq",
  together = FALSE,
  plot_type = "dotplot",
  ...
)

Arguments

sig	Result from extract_significant_genes
according_to	Use this result type for the gprofiler searches.
together	Concatenate the up/down genes into one set?
plot_type	Choose a plot method as the default.
...	Arguments to pass to simple_gprofiler().

elsayed-lab/hpgltools documentation built on April 8, 2024, 1:30 a.m.