all_gprofiler: Run simple_gprofiler on every table from...

View source: R/ontology_gprofiler.R

all_gprofilerR Documentation

Run simple_gprofiler on every table from extract_significant_genes()

Description

Run simple_gprofiler on every table from extract_significant_genes()

Usage

all_gprofiler(
  sig,
  according_to = "deseq",
  together = FALSE,
  plot_type = "dotplot",
  ...
)

Arguments

sig

Result from extract_significant_genes

according_to

Use this result type for the gprofiler searches.

together

Concatenate the up/down genes into one set?

plot_type

Choose a plot method as the default.

...

Arguments to pass to simple_gprofiler().


elsayed-lab/hpgltools documentation built on May 9, 2024, 5:02 a.m.