add_binary_states: Add binary state information to the scd.

View source: R/singlecell.R

add_binary_statesR Documentation

Add binary state information to the scd.

Description

I am adding these only so that it is easier to visualize the cells compared when performing FindAllMarkers(); e.g. it compares each identity to all others; so I imagine it would be nice to see a dimplot or something of each state vs. all others as a binary pair rather than as n separate groups.

Usage

add_binary_states(scd, column = NULL)

Arguments

scd

Seurat single cell dataset.

column

Get identities from this metadata column.

Value

The scd with some new identities set with predicates.


elsayed-lab/hpgltools documentation built on May 9, 2024, 5:02 a.m.