add_binary_states: Add binary state information to the scd.
In elsayed-lab/hpgltools: A pile of (hopefully) useful R functions
add_binary_states R Documentation
Add binary state information to the scd.
Description
I am adding these only so that it is easier to visualize the cells
compared when performing FindAllMarkers(); e.g. it compares each
identity to all others; so I imagine it would be nice to see a
dimplot or something of each state vs. all others as a binary pair
rather than as n separate groups.
Usage
add_binary_states(scd, column = NULL)
Arguments
scd
Seurat single cell dataset.
column
Get identities from this metadata column.
Value
The scd with some new identities set with predicates.
elsayed-lab/hpgltools documentation built on April 8, 2024, 1:30 a.m.
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| add_binary_states | R Documentation |
Add binary state information to the scd.
Description
I am adding these only so that it is easier to visualize the cells compared when performing FindAllMarkers(); e.g. it compares each identity to all others; so I imagine it would be nice to see a dimplot or something of each state vs. all others as a binary pair rather than as n separate groups.
Usage
add_binary_states(scd, column = NULL)
Arguments
scd |
Seurat single cell dataset. |
column |
Get identities from this metadata column. |
Value
The scd with some new identities set with predicates.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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