festim: Computation of a and f
In genostats/FEstim: Genetic Data Analyses in Presence of Inbreeding
festim R Documentation
Computation of a and f
Description
This function is used to compute a and f and other statistical values (p.lrt, likelihood0, likelihood1)
Usage
festim(x, n.cores = 1, verbose = FALSE, debug = FALSE)
Arguments
x
a submap matrix
verbose
whether you want informations about the computation process (default is TRUE)
debug
whether you want advanced output about the computation process (default is FALSE)
Details
This function is using the optim function with an L-BGFS method to find the best value for a and f
Value
returns the submap matrix with the slot a, f, p.lrt, likelihood0 and likelihood1 filled.
Examples
#Please refer to vignette
genostats/FEstim documentation built on Feb. 3, 2023, 7:33 p.m.
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| festim | R Documentation |
Computation of a and f
Description
This function is used to compute a and f and other statistical values (p.lrt, likelihood0, likelihood1)
Usage
festim(x, n.cores = 1, verbose = FALSE, debug = FALSE)
Arguments
x |
a submap matrix |
verbose |
whether you want informations about the computation process (default is TRUE) |
debug |
whether you want advanced output about the computation process (default is FALSE) |
Details
This function is using the optim function with an L-BGFS method to find the best value for a and f
Value
returns the submap matrix with the slot a, f, p.lrt, likelihood0 and likelihood1 filled.
Examples
#Please refer to vignette
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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