setFLOD: Computation of FLOD scores

In genostats/FEstim: Genetic Data Analyses in Presence of Inbreeding

Computation of FLOD scores

Description

This function is uses to compute FLOD scores on individual present in a sample

Usage

setFLOD(submaps, w.id, q = 1e-04)

Arguments

submaps	a atlas object
w.id	The indices of individals for which FLOD are computed
q	The assumed frequency of the mutation involved in the disease for each individual. Default is 0.0001.

Details

This function iterates over the slots submaps_list of the atlas object.

For each submaps in the slots submaps_list of the object, the slot FLOD.prob will be filled with a matrix of dimension : number_inidividual x number_of_markers

Value

the atlas object with each FLOD.prob slot of each submaps in the slot submaps_list computed

See Also

setHBDProb

setHFLOD

genostats/FEstim documentation built on Feb. 3, 2023, 7:33 p.m.