glmHBDPlot: QQ-Plot & Manhattan Plots for glm on HBD prob or FLOD

In genostats/FEstim: Genetic Data Analyses in Presence of Inbreeding

QQ-Plot & Manhattan Plots for glm on HBD prob or FLOD

Description

QQ-Plot & Manhattan Plots for glm on HBD prob or FLOD

Usage

glmHBDPlot(
  x,
  expl_var,
  plot = c("all", "unadj", "adj"),
  qq = FALSE,
  save = FALSE
)

Arguments

x	an atlas object
expl_var	the explanatory variable 'FLOD' or 'HBD_prob'
plot	choose to plot 'all' = adj + unadj, 'adj' only, 'unadj' only (default = all) if 'all' but only 'adj' or 'unadj' data are available the function will only plot available data
qq	choose to plot qqplot (default = FALSE)
save	choose if plot are saved or not (.png format) (default = FALSE)
n.cores	number of cores for parallelization calculation (default = 1)

See Also

glmHBD

genostats/FEstim documentation built on Feb. 3, 2023, 7:33 p.m.