setHBDProbAndFLODBySnps: Computation of HBD probabilities and FLOD scores by snps

In genostats/FEstim: Genetic Data Analyses in Presence of Inbreeding

Computation of HBD probabilities and FLOD scores by snps

Description

This function is used to compute HBD probabilities and FLOD scores on individuals in a sample

Usage

setHBDProbAndFLODBySnps(atlas, w.id, q = 1e-04)

Arguments

atlas	an atlas object
w.id	The indices of individals for which HBD probabilities are computed

Details

This function iterates over the slots submaps_list of the atlas object.

For each submaps in the slots submaps_list of the object, the slots HBD_recap and FLOD_recap will be updated with a matrix of dimension : number_individual x number_of_markers

Value

the atlas object with HBD_recap and FLOD_recap by snps

See Also

setHFLOD

genostats/FEstim documentation built on Feb. 3, 2023, 7:33 p.m.