View source: R/definitions_magick.R
cellStrip | R Documentation |
cellMagick configured for prodicing a ucid's strip
cellStrip( cdata, paths, equalize_images = F, normalize_images = F, channels = c("BF.out"), animation_delay = 1/3, stack_time_horizontally = TRUE, id_column = "ucid", time_colum = "t.frame", ... )
cdata |
A Rcell data.frame (not the object). |
paths |
A paths dataframe with file path, t.frame, position and channel information of each picture. |
equalize_images |
Use magick's function to "equalize" the image when TRUE (FALSE by default). |
normalize_images |
Use magick's function to "normalize" the image when TRUE (FALSE by default). |
channels |
Name of the CellID channel (BF, BF.out, RFP, etc.). "BF.out" by default. |
stack_time_horizontally |
Time increases from left to right (TRUE) or from up to down (FALSE). |
... |
Arguments passed on to magickCell. |
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