cimage.cell.image | R Documentation |
returns cropped cell images arranged in some way
## S3 method for class 'cell.image' cimage( X, formula = NULL, subset = NULL, facets = NULL, scales = "fixed", allow.expressions = FALSE, nx = NULL, ny = NULL, facets.nx = NULL, facets.ny = NULL, bg.col = "white", border = 1, facets.border = 1, rev.y = TRUE, font.size = 14, font.col = "black", display = interactive(), ... )
X |
cell.data or cell.image object to plot |
formula |
formula of the form 'var1+var2~var3' specifying how the images are to be ordered. See details. |
subset |
logical expression indicating elements or rows to keep. Don't specify channel here |
facets |
formula of the form 'var1+var2~var3' specifying how to facet the plot. See details. |
scales |
either 'none', 'fixed' or 'free' axis for each facet |
allow.expressions |
allow expressions in formulas, set to TRUE when called from cimage.cell.data |
nx |
number of columns of images within each facet. Used with |
ny |
number of rows of images within each facet. Used with |
facets.nx |
number of columns of facets. Used with |
facets.ny |
number of rows of facets. Used with |
bg.col |
The background color of the plot |
border |
the width in pixels of the border between images |
facets.border |
the width in pixels of the border between facets |
rev.y |
boolean indicating if the y axis should be reversed |
font.size |
The size of the font to use, in pixels |
font.col |
The color of the font to use |
display |
boolean indicating if the created image should be displayed |
... |
further arguments for methods. |
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