adjust.clone.vaf: Adjust clone VAF according to significant different test...
In hdng/clonevol: Clonal ordering and visualization
Description
Adjust clone VAF according to significant different test result
If two clones have close VAF, adjust the smaller VAF to the bigger
TODO: this test does not work yet, has to think more carefully about what
test to use, as well as test involving multiple samples
Usage
1
2
adjust.clone.vaf(clone.vafs, var, cluster.col.name, founding.cluster = 1,
adjust.to.founding.cluster.only = TRUE, p.value.cut = 0.01)
hdng/clonevol documentation built on May 17, 2019, 3:19 p.m.
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Description
Adjust clone VAF according to significant different test result If two clones have close VAF, adjust the smaller VAF to the bigger TODO: this test does not work yet, has to think more carefully about what test to use, as well as test involving multiple samples
Usage
1 2 | adjust.clone.vaf(clone.vafs, var, cluster.col.name, founding.cluster = 1,
adjust.to.founding.cluster.only = TRUE, p.value.cut = 0.01)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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