compare.clone.trees.removing.leaves: Compare two merged clonal evolution trees
In hdng/clonevol: Clonal ordering and visualization
Description
Compare two clonal evolution trees to see if they differ
and if they also differ if all termial node (leaves) are removed.
This is useful to determine the number of unique models ignoring
sample specific clones which often give too many models when they
are present and low frequency. This function return 0 if tree match
at leaves, 1 if not match at leave but match when leaves are removed
2 if not matching at internal node levels
Usage
1
compare.clone.trees.removing.leaves(v1, v2, ignore.seeding = FALSE)
Arguments
v1:
clonal evolution tree data frame 1
v2:
clonal evolution tree data frame 1
hdng/clonevol documentation built on May 17, 2019, 3:19 p.m.
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Description
Compare two clonal evolution trees to see if they differ and if they also differ if all termial node (leaves) are removed. This is useful to determine the number of unique models ignoring sample specific clones which often give too many models when they are present and low frequency. This function return 0 if tree match at leaves, 1 if not match at leave but match when leaves are removed 2 if not matching at internal node levels
Usage
1 | compare.clone.trees.removing.leaves(v1, v2, ignore.seeding = FALSE)
|
Arguments
v1: |
clonal evolution tree data frame 1 |
v2: |
clonal evolution tree data frame 1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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