clonevol: Clonal ordering and visualization

Estimate VAFs of clones/clusters by calculating the median of the VAFs of all variants provided.

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estimate.clone.vaf(v, cluster.col.name = "cluster", vaf.col.names = NULL,
  vaf.in.percent = TRUE, method = "median", ref.count.col.names = NULL,
  var.count.col.names = NULL, depth.col.names = NULL)

`v:`	data frame containing variants' VAF and clustering
`cluster.col.name:`	name of the column that hold the cluster ID
`vaf.col.names:`	names of the columns that hold VAFs
`method:`	median or mean