clone.vaf.diff: Test if two clones have different VAFs Deprecated!
In hdng/clonevol: Clonal ordering and visualization
Description
Test if the two clones/clusters have different VAFs, using a
Mann-Whitney U test
Usage
1
clone.vaf.diff(clone1.vafs, clone2.vafs, p.value.cut = 0.05)
Arguments
clone1.vafs:
VAFs of all variants in clone/cluster 1
clone2.vafs:
VAFs of all variants in clone/cluster 2
p.value.cut:
significant level (if the test produce p.value
less than or equal to p.val => significantly different)
hdng/clonevol documentation built on May 17, 2019, 3:19 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description
Test if the two clones/clusters have different VAFs, using a Mann-Whitney U test
Usage
1 | clone.vaf.diff(clone1.vafs, clone2.vafs, p.value.cut = 0.05)
|
Arguments
clone1.vafs: |
VAFs of all variants in clone/cluster 1 |
clone2.vafs: |
VAFs of all variants in clone/cluster 2 |
p.value.cut: |
significant level (if the test produce p.value less than or equal to p.val => significantly different) |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.