hdng/clonevol: Clonal ordering and visualization
Version 0.99.9

clonevol performs clonal ordering and visualization using the variant clustering results. It uses a bootstrap resampling technique to estimate the cellular prevalence of the clones within samples and probabilistically model clonal ordering constraints (sum and cross rules), hence it tolerates error and variability in cellular prevalence estimates of individual variants.

Getting started

Package details

Bioconductor views DNASeq ExomeSeq Genetics Software SomaticMutation StatisticalMethod Visualization WholeGenome
Maintainer
LicenseGPL-3 | file LICENSE
Version0.99.9
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("hdng/clonevol")
hdng/clonevol documentation built on Sept. 14, 2017, 5:46 a.m.