plot.cell.population: Plot a tumor as a cloud of cells reflecting the cellular...

In hdng/clonevol: Clonal ordering and visualization

Description

Plot a tumor as a cloud of cells reflecting the cellular frequencies

Usage

## S3 method for class 'cell.population'
plot(cell.frac, colors, labels = NULL,
  cell.cex = 2, delta = NULL, cell.border.color = "black",
  cell.border.size = 0.1, num.cells = 200, layout = "cloud",
  clone.grouping = "random", frame = FALSE)

Arguments

cell.frac:	cellular fraction of the clones (0-1)
colors:	colors of the clones
num.cells:	number of cells to plot
layout:	"plate" (square) or "cloud" (default = "cloud")
cell.border.color:	see plot.cloud.of.cells
cell.border.size:	see plot.cloud.of.cells
clone.grouping:	see plot.cloud.of.cells
frame:	put a frame around the cell cloud

hdng/clonevol documentation built on May 17, 2019, 3:19 p.m.