API for hongzhonglu/Yeastspot3D
Mutation mapping analysis with protein 3D structure for yeast
| Global functions | |
|---|---|
| PositionResidueSNP | Man page Source code |
| ResidueSum | Man page Source code |
| annotateSNP | Man page Source code |
| changeATCG | Man page |
| checkTanslatedProtein | Man page Source code |
| chooseStrain | Man page Source code |
| clumpsAnalysis | Man page Source code |
| clusterAnalysis | Man page Source code |
| countMutationProtein | Man page |
| findPPosition | Man page Source code |
| getDomainCoordinate | Man page Source code |
| getGeneCoordinate | Man page Source code |
| getGeneName | Man page Source code |
| getGeneNameWithSNP | Man page Source code |
| getGeneNameWithSNP1 | Man page Source code |
| getHotPvalue | Man page Source code |
| getHotVertice | Man page Source code |
| getMultipleMatchParameter | Man page Source code |
| getOriginalCoordinateProtein | Man page Source code |
| getProteinFromCDS | Man page |
| getPvalue | Man page Source code |
| getSampleWAP | Man page Source code |
| getSingleMatchParameter | Man page Source code |
| getTotalWAP | Man page |
| hotSpotAnalysis | Man page |
| loadPackageForSNPanalysis | Man page Source code |
| mappingCoordinateFrom3DtoProtein | Man page Source code |
| mergeActiveSiteInf | Man page Source code |
| mergeGeneAnnotationFeature | Man page Source code |
| mergeHotspot | Man page Source code |
| parseMutipleSite | Man page Source code |
| parseSingleSite | Man page Source code |
| pdb.ResidueDistance | Man page |
| pdb.ResolutionAll | Man page Source code |
| pdb.ResolutionEX | Man page Source code |
| pdb.Sequence | Man page Source code |
| pdbExFilter | Man page Source code |
| pdbHomoFilter | Man page Source code |
| plotNullDistribution | Man page Source code |
| preprocessSNP | Man page Source code Source code |
| printSNPforGene | Man page Source code |
| qualityCheckFromCDStoProtein | Man page Source code |
| removeStopCoden | Man page Source code |
| sampleStand | Man page |
| snpFilterBasedMAF | Man page Source code |
| splitAndCombine | Man page Source code |
