findPPosition: Obtain the mutation result of a nsSNP

In hongzhonglu/Yeastspot3D: Mutation mapping analysis with protein 3D structure for yeast

Description

This function is used to find the postion of mutated amino acids based on genomics mutation

Usage

findPPosition(mutatedPosition, alted, geneName, gene_snp0)

Arguments

mutatedPosition	A number
alted	A string, like 'A','G','C','T'
geneName	A string containing the systematic gene name
gene_snp0	A list containing the detailed annotation of one gene

Value

A vector containing the 0 and 1 while 1 represent that the residue mutated in the corresponding position

hongzhonglu/Yeastspot3D documentation built on March 28, 2020, 6:06 p.m.