array_preprocess: Preprocess of Microarray data

In huerqiang/GeoTcgaData: Processing Various Types of Data on GEO and TCGA

Preprocess of Microarray data

Description

Preprocess of Microarray data

Usage

array_preprocess(x, missing_value = "knn", string = " /// ")

Arguments

x	matrix of Microarray data, each column is a sample, and each row is a gene.
missing_value	Method to impute missing expression data, one of "zero" and "knn".
string	a string, sep of the gene

Value

matrix

Examples

arraylist <- get_geo_array("GSE781")
arraylist <- lapply(arraylist, array_preprocess)

huerqiang/GeoTcgaData documentation built on March 21, 2024, 1:42 a.m.