cluster_array: cluster probes of Microarray data

In huerqiang/GeoTcgaData: Processing Various Types of Data on GEO and TCGA

cluster probes of Microarray data

Description

cluster probes of Microarray data

Usage

cluster_array(x, clusterCutoff = 0.7)

Arguments

x	matrix of Microarray data, the first is the name of the gene, and the others are the expression value.
clusterCutoff	Pearson correlation threshold to cut off the hierarchical tree.

Value

data.frame

Examples

arraylist <- get_geo_array("GSE781")
arraylist <- lapply(arraylist, array_preprocess)
arraylist_cluster <- lapply(arraylist, cluster_array)

huerqiang/GeoTcgaData documentation built on March 21, 2024, 1:42 a.m.