differential_limma: differential_limma

In huerqiang/GeoTcgaData: Processing Various Types of Data on GEO and TCGA

differential_limma

Description

differential_limma

Usage

differential_limma(df, group, adjust.method = "BH")

Arguments

df	data.frame of the omic data
group	a vector, group of samples.
adjust.method	adjust.method.

Value

data.frame

Examples

df <- matrix(runif(200), 25, 8)
df <- as.data.frame(df)
rownames(df) <- paste0("gene", 1:25)
colnames(df) <- paste0("sample", 1:8)
group <- sample(c("group1", "group2"), 8, replace = TRUE)
result <- differential_limma(df = df, group = group)

huerqiang/GeoTcgaData documentation built on March 21, 2024, 1:42 a.m.