calculate_variance: Get variable genes and scale data.
In igordot/scooter: Streamlined scRNA-Seq Analysis Pipeline
calculate_variance R Documentation
Get variable genes and scale data.
Description
Get variable genes and scale data.
Usage
calculate_variance(
seurat_obj,
assay = "RNA",
nfeatures = 2000,
log_file = NULL
)
Arguments
seurat_obj
Seurat object.
assay
Assay.
nfeatures
Number of variable features to output.
log_file
A log file.
Value
A named list of the top features, and the scaled data.
igordot/scooter documentation built on Nov. 20, 2023, 5:55 a.m.
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| calculate_variance | R Documentation |
Get variable genes and scale data.
Description
Get variable genes and scale data.
Usage
calculate_variance(
seurat_obj,
assay = "RNA",
nfeatures = 2000,
log_file = NULL
)
Arguments
seurat_obj |
Seurat object. |
assay |
Assay. |
nfeatures |
Number of variable features to output. |
log_file |
A log file. |
Value
A named list of the top features, and the scaled data.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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