load_sample_counts_matrix: Read in Gene Expression and Antibody Capture data from a 10x...
In igordot/scooter: Streamlined scRNA-Seq Analysis Pipeline

load_sample_counts_matrix

R Documentation

Read in Gene Expression and Antibody Capture data from a 10x Genomics Cell Ranger sparse matrix or from a text file.

Read in Gene Expression and Antibody Capture data from a 10x Genomics Cell Ranger sparse matrix or from a text file.

load_sample_counts_matrix(sample_name, path, log_file = NULL)

`sample_name`	A character that will be used as a prefix for all cell names.
`path`	Path to directory containing 10x matrix, or path to a text file.
`log_file`	Filename for the log file.

Named list of matrices. One matrix for each data type. Currently the only two data types are 'Gene Expression' and 'Antibody Capture'

igordot/scooter documentation built on Nov. 20, 2023, 5:55 a.m.

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