calcResiduals: calcResiduals
In jasonserviss/CIMseq: CIMseq is a software suite for analysis of scRNAseq data that has been produced using the cellular interactions by multiplet sequencing method
Description
Usage
Arguments
Value
Author(s)
Description
Calculates the residuals for each gene and multiplet after deconvolution
based on the CIMseqSwarm results.
Usage
1
2
calcResiduals(singlets, multiplets, swarm, include = NULL,
fractions = NULL, ...)
Arguments
singlets
A CIMseqSinglets object.
multiplets
A CIMseqMultiplets object.
swarm
A CIMseqSwarm object.
include
character; If residuals should only be calculated for a
subset of the multiplets, include their names here. Default is to calculate
for all multiplets.
fractions
matrix; A matrix of fractions. By default the fractions in
the CIMseqSwarm object are used.
...
additional arguments to pass on
Value
Residuals (add more description).
Author(s)
Jason T. Serviss
jasonserviss/CIMseq documentation built on Jan. 11, 2020, 4:42 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Author(s)
Description
Calculates the residuals for each gene and multiplet after deconvolution based on the CIMseqSwarm results.
Usage
1 2 | calcResiduals(singlets, multiplets, swarm, include = NULL,
fractions = NULL, ...)
|
Arguments
singlets |
A CIMseqSinglets object. |
multiplets |
A CIMseqMultiplets object. |
swarm |
A CIMseqSwarm object. |
include |
character; If residuals should only be calculated for a subset of the multiplets, include their names here. Default is to calculate for all multiplets. |
fractions |
matrix; A matrix of fractions. By default the fractions in the CIMseqSwarm object are used. |
... |
additional arguments to pass on |
Value
Residuals (add more description).
Author(s)
Jason T. Serviss
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.