calculateEdgeStats: calculateEdgeStats
In jasonserviss/CIMseq: CIMseq is a software suite for analysis of scRNAseq data that has been produced using the cellular interactions by multiplet sequencing method
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Calculates the score (obs / expected) and p-value for all possible
connections.
Usage
1
2
calculateEdgeStats(swarm, singlets, multiplets, theoretical.max = Inf,
...)
Arguments
swarm
A CIMseqSwarm object.
singlets
A CIMseqSinglets object.
multiplets
A CIMseqMultiplets object.
theoretical.max
integer; See estimateCells.
...
additional arguments to pass on
Value
CIMseqSwarm connection weights and p-values.
Author(s)
Jason T. Serviss
Examples
1
2
3
jasonserviss/CIMseq documentation built on Jan. 11, 2020, 4:42 a.m.
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Description Usage Arguments Value Author(s) Examples
Description
Calculates the score (obs / expected) and p-value for all possible connections.
Usage
1 2 | calculateEdgeStats(swarm, singlets, multiplets, theoretical.max = Inf,
...)
|
Arguments
swarm |
A CIMseqSwarm object. |
singlets |
A CIMseqSinglets object. |
multiplets |
A CIMseqMultiplets object. |
theoretical.max |
integer; See |
... |
additional arguments to pass on |
Value
CIMseqSwarm connection weights and p-values.
Author(s)
Jason T. Serviss
Examples
1 2 3 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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