Description Usage Arguments Value Author(s) Examples
Returns the edges detected in a multiplet.
1 2 3 4 5 | getEdgesForMultiplet(swarm, ...)
## S4 method for signature 'CIMseqSwarm'
getEdgesForMultiplet(swarm, singlets, multiplets,
multipletName = NULL, theoretical.max = Inf, drop = TRUE, ...)
|
swarm |
A CIMseqSwarm object. |
... |
additional arguments to pass on |
singlets |
A CIMseqSinglets object. |
multiplets |
A CIMseqMultiplets object. |
multipletName |
character; The name of the multiplet of interest. |
theoretical.max |
integer; See |
drop |
logical; Remove self connections? |
Edge names. Note that multiplets that contain no connections are not included in the output and neither are self connections.
Jason T. Serviss
1 2 3 4 | output <- getEdgesForMultiplet(
CIMseqSwarm_test, CIMseqSinglets_test, CIMseqMultiplets_test,
"m.NJB00204.G04"
)
|
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