STutility collects useful tools for Spatial Transcriptomics data analysis within R. The package is built on top of popular Seurat R package, which is a toolkit for analysis and exploration of single cell RNA sequencing data (scRNAseq). STutility adds image functionallity to the Seurat workflow, allowing RNAseq data to be put in a spatial tissue context. Tutorials for data transformation, QC, analysis and visualization can be found on our website: https://ludvigla.github.io/STUtility_web_site/.
Package details |
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Maintainer | |
License | MIT + file LICENSE |
Version | 1.1.1 |
Package repository | View on GitHub |
Installation |
Install the latest version of this package by entering the following in R:
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