grid.from.staffli: Creates 2D point patterns for a set of images
In jbergenstrahle/STUtility: Analysis and visualization of Spatial Transcriptomics data
grid.from.staffli R Documentation
Creates 2D point patterns for a set of images
Description
Creates 2D point patterns for a set of images
Usage
grid.from.staffli(
object,
type,
limit = 0.3,
maxnum = 1000,
edges = FALSE,
custom.edge.detector = NULL
)
Arguments
object
Staffli object
type
Sets the image type to run segmentation on
limit
Sets the intensity threshold in the interval [0, 1]
maxnum
Integer value specifying the maximum number of points
edges
Extracts the coordinates of the edges instead
custom.edge.detector
Custom function used to detect edges
jbergenstrahle/STUtility documentation built on March 14, 2023, 7:15 a.m.
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| grid.from.staffli | R Documentation |
Creates 2D point patterns for a set of images
Description
Creates 2D point patterns for a set of images
Usage
grid.from.staffli( object, type, limit = 0.3, maxnum = 1000, edges = FALSE, custom.edge.detector = NULL )
Arguments
object |
Staffli object |
type |
Sets the image type to run segmentation on |
limit |
Sets the intensity threshold in the interval [0, 1] |
maxnum |
Integer value specifying the maximum number of points |
edges |
Extracts the coordinates of the edges instead |
custom.edge.detector |
Custom function used to detect edges |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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