convert_genotypes: reformats the genotypes dataset
In jeremymcrae/recessiveStats: Enrichment of recessive variants within genes
Description
Usage
Arguments
Value
Description
reformats the genotypes dataset
Usage
1
convert_genotypes(vars, vep, probands)
Arguments
vars
seqminer::readVCFToListByRange output, list of values, which
includes a genotype matrix as "GT", and sample IDs as sampleId.
vep
dataframe of VEP consequences for the vars entry
probands
vector of proband IDs, or NA, or a zero-length vector.
Value
dataframe of variants
jeremymcrae/recessiveStats documentation built on May 19, 2019, 5:08 a.m.
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Description Usage Arguments Value
Description
reformats the genotypes dataset
Usage
1 | convert_genotypes(vars, vep, probands)
|
Arguments
vars |
seqminer::readVCFToListByRange output, list of values, which includes a genotype matrix as "GT", and sample IDs as sampleId. |
vep |
dataframe of VEP consequences for the vars entry |
probands |
vector of proband IDs, or NA, or a zero-length vector. |
Value
dataframe of variants
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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