Description Usage Arguments Examples
filter correlation regions
1 2 3 | filter_correlated_regions(chromosome = paste0("chr", 1:22), template,
cutoff = 0.05, adj_method = "BH", meth_diameter_cutoff = 0.25, meth_IQR_cutoff = 0.25,
anova_cutoff = 0.05)
|
chromosome |
chromosomes |
template |
template to find cr files |
cutoff |
cutoff of adjusted p-values |
adj_method |
method for calculating adjusted p-values |
meth_diameter_cutoff |
cutoff for diameters |
meth_IQR_cutoff |
cutoff for IQR, if there is no subtype information, IQR is used to remove less variable methylation |
anova_cutoff |
cutoff for ANOVA test |
1 2 | # There is no example
NULL
|
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