CTCF_in_10a_overlaps_gr: 100 randomly selected regions from overlapping CTCF peaks in...

CTCF_in_10a_overlaps_grR Documentation

100 randomly selected regions from overlapping CTCF peaks in 10a cell ChIP-seq

Description

MACS2 narrowPeak calls on pooled biological replicates at pval 1e-5 and then 0.05 IDR filtered. IDR cutoffs determined by comparing top 150,000 pvalue sorted peak in replicates.

Format

GenomicRanges with 3 metadata columns of membership table

Details

See GEO series GSE98551 for details.

part of CTCF_in_10a_data


jrboyd/seqsetvis documentation built on March 17, 2024, 3:14 p.m.