CTCF_in_10a_overlaps_gr: 100 randomly selected regions from overlapping CTCF peaks in...
In jrboyd/seqsetvis: Set Based Visualizations for Next-Gen Sequencing Data
CTCF_in_10a_overlaps_gr R Documentation
100 randomly selected regions from overlapping CTCF peaks in 10a cell
ChIP-seq
Description
MACS2 narrowPeak calls on pooled biological replicates at pval 1e-5 and
then 0.05 IDR filtered. IDR cutoffs determined by comparing top 150,000
pvalue sorted peak in replicates.
Format
GenomicRanges with 3 metadata columns of membership table
Details
See GEO series GSE98551 for details.
part of CTCF_in_10a_data
jrboyd/seqsetvis documentation built on Dec. 10, 2024, 11:23 a.m.
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| CTCF_in_10a_overlaps_gr | R Documentation |
100 randomly selected regions from overlapping CTCF peaks in 10a cell ChIP-seq
Description
MACS2 narrowPeak calls on pooled biological replicates at pval 1e-5 and then 0.05 IDR filtered. IDR cutoffs determined by comparing top 150,000 pvalue sorted peak in replicates.
Format
GenomicRanges with 3 metadata columns of membership table
Details
See GEO series GSE98551 for details.
part of CTCF_in_10a_data
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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