get_mapped_reads: get_mapped_reads
In jrboyd/seqsetvis: Set Based Visualizations for Next-Gen Sequencing Data
get_mapped_reads R Documentation
get_mapped_reads
Description
get_mapped_reads
Usage
get_mapped_reads(bam_files)
Arguments
bam_files
Path to 1 or more bam files. Must be indexed.
Value
the total mapped reads in each bam file as a named numeric vector.
Examples
bam_file = system.file("extdata/test.bam", package = "seqsetvis", mustWork = TRUE)
get_mapped_reads(bam_file)
jrboyd/seqsetvis documentation built on March 17, 2024, 3:14 p.m.
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| get_mapped_reads | R Documentation |
get_mapped_reads
Description
get_mapped_reads
Usage
get_mapped_reads(bam_files)
Arguments
bam_files |
Path to 1 or more bam files. Must be indexed. |
Value
the total mapped reads in each bam file as a named numeric vector.
Examples
bam_file = system.file("extdata/test.bam", package = "seqsetvis", mustWork = TRUE)
get_mapped_reads(bam_file)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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