easyLoad_FUN: easyLoad_FUN takes a character vector of file paths run an...

In jrboyd/seqsetvis: Set Based Visualizations for Next-Gen Sequencing Data

easyLoad_FUN takes a character vector of file paths run an arbitrary function defined in load_FUN

Description

easyLoad_FUN takes a character vector of file paths run an arbitrary function defined in load_FUN

Usage

easyLoad_FUN(
  file_paths,
  load_FUN,
  file_names = NULL,
  n_cores = getOption("mc.cores", 1),
  ...
)

Arguments

file_paths	character vector of paths to narrowPeak files. If named, those names will be used in output unless overriden by providing file_names.
load_FUN	Arbitrary function that takes at least a file path as argument. May take other arguments that should be set in call to easyLoad_FUN.
file_names	character vector of names for output list. If not NULL will override any existing names for file_paths. Default is NULL.
n_cores	number of cores to use, uses mc.cores option if set or 1.
...	extra parameters passed to load_FUN

Value

a named list of results from load_FUN

Examples

bed_f = system.file("extdata/test_loading.bed",
    package = "seqsetvis", mustWork = TRUE)
easyLoad_bed(bed_f, "my_bed")

jrboyd/seqsetvis documentation built on Dec. 10, 2024, 11:23 a.m.