subGSEA: Subset GSEA results
In kevincjnixon/BinfTools: Useful functions for standard analyses
subGSEA R Documentation
Subset GSEA results
Description
Subset GSEA results
Usage
subGSEA(x, p = 0.05, n = 100, byNES = TRUE)
Arguments
x
GSEA results produced by GSEA() function
p
FDR threshold to filter GSEA results. Default = 0.05.
n
Number of top terms to return. Default is 100. Set to Inf to return all possible filtered results.
byNES
Boolean indicating how terms should be ordered. If TRUE (default), terms are ordered by decreasing absolute normalized enrichment score. If FALSE, terms are ordered by decreasing significance.
kevincjnixon/BinfTools documentation built on July 10, 2024, 11:46 a.m.
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| subGSEA | R Documentation |
Subset GSEA results
Description
Subset GSEA results
Usage
subGSEA(x, p = 0.05, n = 100, byNES = TRUE)
Arguments
x |
GSEA results produced by GSEA() function |
p |
FDR threshold to filter GSEA results. Default = 0.05. |
n |
Number of top terms to return. Default is 100. Set to Inf to return all possible filtered results. |
byNES |
Boolean indicating how terms should be ordered. If TRUE (default), terms are ordered by decreasing absolute normalized enrichment score. If FALSE, terms are ordered by decreasing significance. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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