subRes: Subset results objects using various parameters

In kevincjnixon/BinfTools: Useful functions for standard analyses

Subset results objects using various parameters

Description

Subset results objects using various parameters

Usage

subRes(res, genes = NULL, p = NULL, pval = NULL, FC = NULL)

Arguments

genes	character vector of genes in rownames(res) to subset. Default=NULL.
p	adjusted p-value threshold. Genes must have padj<p to be returned. Default=NULL.
pval	raw p-value threshold. Genes must have pvalue<pval to be returned. Default=NULL.
FC	absolute log2FoldChange threshold. Genes must have |log2FoldChange|>FC to be returned. Default=NULL.
results	data frame

Value

Data frame subset to genes matching any and all of the provided parametes.

kevincjnixon/BinfTools documentation built on July 10, 2024, 11:46 a.m.